Select purpose of the ship. Doesn't have any direct effect on the ship's statistics, cost, etc but guides the design of the ship through the later stages
Select astrogation systems
Select communication and sensor systems
Select Weapons and Defenses
Select Specialized equipment (mining, cargo, etc)
Determine cargo bay size
Determine crew/passenger size
Select crew and passenger accommodations
Determine life support requirements
Determine initial computer requirements
Determine Power requirements
Determine hull type
Determine hull size
Determine ship's total mass
Pick engine type, number and sizes
Finalize computer requirements and verify power requirements and size
Calculate final cost
Determine ADF, DCR, etc